1. CONFESS::Results
    Results
    json| rda| rds
    list
  2. CONFESS::clu
    clu
    json| rda| rds
    list
  3. CONFESS::estimates
    estimates
    json| rda| rds
    list
  4. CONFESS::estimates.2
    estimates.2
    json| rda| rds
    list
  5. CONFESS::files
    files
    json| rda| rds
    list
  6. CONFESS::step1
    step1
    json| rda| rds
    list
  7. CONFESS::step2
    step2
    json| rda| rds
    list
  8. CONFESS::step2.1
    step2.1
    json| rda| rds
    list
  9. CONFESS::step3
    step3
    json| rda| rds
    list
  10. CONFESS::step3.1
    step3.1
    json| rda| rds
    list
  11. CONFESS::step4
    step4
    json| rda| rds
    list
  12. CONFESS::steps2_4
    steps2_4
    json| rda| rds
    list
  13. deltaGseg::pvals
    pvalues data
    rda| rds
    pvclust
  14. deltaGseg::simtraj
    Sample trajectory series
    rda| rds
    Trajectories
  15. deltaGseg::simtraj.tr
    Sample trajectory series
    rda| rds
    TransTrajectories
  16. deltaGseg::simtraj.tr2
    Sample trajectory series
    rda| rds
    TransTrajectories
  17. deltaGseg::traj1
    Sample trajectory series
    rda| rds
    Trajectories
  18. deltaGseg::traj1.denoise
    Sample trajectory series
    rda| rds
    SegTrajectories
  19. deltaGseg::traj1.ss
    Sample trajectory series
    rda| rds
    SegSeriesTrajectories
  20. deltaGseg::traj1.tr
    Sample trajectory series
    rda| rds
    TransTrajectories
  21. SPLINTER::acceptor.m
    acceptor.m
    csv| json| rda| rds
    matrix|4 x 15
  22. SPLINTER::compatible_cds
    compatible_cds
    rda| rds
    list
  23. SPLINTER::compatible_tx
    compatible_tx
    rda| rds
    list
  24. SPLINTER::donor.m
    donor.m
    csv| json| rda| rds
    matrix|4 x 9
  25. SPLINTER::pcr_result1
    pcr_result1
    csv| xlsx| json| ndjson| rda| rds
    data.frame|1 x 2
  26. SPLINTER::primers
    primers
    csv| xlsx| json| ndjson| rda| rds
    data.frame|5 x 28
  27. SPLINTER::region_minus_exon
    region_minus_exon
    rda| rds
    CompressedGRangesList
  28. SPLINTER::roi
    roi
    rda| rds
    list
  29. SPLINTER::splice_data
    splice_data
    json| rda| rds
    list
  30. SPLINTER::splice_fasta
    splice_fasta
    csv| xlsx| json| ndjson| rda| rds
    data.frame|5 x 2
  31. SPLINTER::thecds
    thecds
    rda| rds
    CompressedGRangesList
  32. SPLINTER::theexons
    theexons
    rda| rds
    CompressedGRangesList
  33. SPLINTER::valid_cds
    valid_cds
    rda| rds
    CompressedGRangesList
  34. SPLINTER::valid_tx
    valid_tx
    rda| rds
    CompressedGRangesList
  35. ssviz::counts
    counts data
    json| rda| rds
    numeric
  36. ssviz::ctrlbam
    ctrlbam data
    rda| rds
    DFrame
  37. ssviz::pctrlbam
    pctrlbam data
    rda| rds
    DFrame
  38. ssviz::ptreatbam
    ptreatbam data
    rda| rds
    DFrame
  39. ssviz::treatbam
    treatbam data
    rda| rds
    DFrame